Module Bistro_bioinfo.Samtools

type 'a format

val bam : Defs.bam format

val sam : Defs.sam format

val sort : ?⁠on:[ `name | `position ] ‑> Defs.bam Bistro.Std.workflow ‑> Defs.bam Bistro.Std.workflow

val indexed_bam_of_sam : Defs.sam Bistro.Std.workflow ‑> Defs.indexed_bam Bistro.Std.workflow

val indexed_bam_of_bam : Defs.bam Bistro.Std.workflow ‑> Defs.indexed_bam Bistro.Std.workflow

val indexed_bam_to_bam : ([ `indexed_bam ], Defs.bam) Bistro.Std.selector

val bam_of_sam : Defs.sam Bistro.Std.workflow ‑> Defs.bam Bistro.Std.workflow

val sam_of_bam : Defs.bam Bistro.Std.workflow ‑> Defs.sam Bistro.Std.workflow