Module Bistro_bioinfo.Fastq_screen

val fastq_screen : ?⁠bowtie2_opts:string ‑> ?⁠filter:[ `Not_map | `Uniquely | `Multi_maps | `Maps | `Not_map_or_Uniquely | `Not_map_or_Multi_maps | `Ignore ] list ‑> ?⁠illumina:bool ‑> ?⁠nohits:bool ‑> ?⁠pass:int ‑> ?⁠subset:int ‑> ?⁠tag:bool ‑> ?⁠threads:int ‑> ?⁠top:[ `top1 of int | `top2 of int * int ] ‑> ?⁠lightweight:bool ‑> 'a Defs.fastq Bistro.Std.workflow ‑> (string * Defs.fasta Bistro.Std.workflow) list ‑> [ `fastq_screen ] Bistro.Std.directory Bistro.Std.workflow
val html_report : ([ `fastq_screen ], Bistro.Std.htmlBistro.Std.selector